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UID:news3@spatialomicsnetwork.unibas.ch
DTSTAMP;TZID=Europe/Zurich:20260710T162801
DTSTART;TZID=Europe/Zurich:20260911T090000
SUMMARY:3rd Basel Spatial Omics Symposium
DESCRIPTION:Registration is now open.\\r\\nUse the link below for registrat
 ions. Abstract submissions are closed now.  \\r\\nClick here for Registra
 tion\\r\\nFollowing the success of our last event\, which brought together
  over 250 registered participants from academia and industry\, the Spatial
  Omics Network Basel is holding its next symposium on Friday\, September 1
 1th\, 2026  in the Maurice E. Müller Hall at the Biozentrum in Basel. Th
 is symposium has become a key local forum for the Spatial Omics community 
 in Basel. This interactive full-day event will bring together researchers\
 , technology developers\, and students interested in the development and a
 pplication of Spatial Omics technologies. The event will feature scientifi
 c presentations from academic and industry groups across the Basel area\, 
 including contributions from the University of Basel (Biozentrum\, DBM\, I
 OB)\, ETH (D-BSSE)\, Roche\, Novartis\, FMI\, and BIIE. The symposium is f
 ree of charge and is organised by the Basel Spatial Omics Network.\\r\\nSc
 ientific program:\\r\\n\\r\\n TimeProgram 8:009:00Registrations    
     Morning session9:009:05Welcome note9:059:45Keynote speaker - Matts
  Nilsson (SciLifeLab) - Spatial transcriptomics by in situ sequencing9:451
 0:05Yinan Wan (Biozentrum) - Whole-embryo spatiotemporal transcriptomics 
 at subcellular resolution10:0510:35Tech Watch: Sponsors’ welcome note an
 d flash talks10:3511:20Coffee break and poster session11:2011:40Benedek Pe
 sti (Roche) - Spatial transcriptomics reveals a niche-specific interferon 
 signature induced by TREM2-targeted therapy11:4012:00Kristy Ou (DBM) - Tu
 mor cell state reprogramming couples with microenvironment remodeling alon
 g the follicular lymphoma transformation axis12:0012:20Curdin Franziscus (
 Biozentrum) - SPEx: Compartment-Resolved Proteomics via Expansion Microsc
 opy–Guided Microdissection12:2012:40Panel discussion (Session speakers 
 + Platinum & Gold sponsor representatives)Lunch12:4013:45Lunch      
     Afternoon session13:4514:05Sarp Uzun (Universitätsspital Basel) 
 - Spatial proteomics and transcriptomics of checkpoint inhibitor-induced l
 iver injury link shared liver–tumour CD8⁺ T cell clones to cytotoxicit
 y and macrophage crosstalk14:0514:25Laurent Guerard (Biozentrum) - A Unifi
 ed Backbone for Spatial Omics: Leveraging SpatialData and Sopa Beyond MERS
 COPE14:2514:45Mariana Ribeiro (IOB) - FLIGHT-seq: Full-Length Isoform lonG
 -read\, High-Throughput sequencing with spatial resolution14:4515:05Tech W
 atch: Core Facilities overview15:0515:50Coffee break and poster session15
 :5016:10Jonas Zierer (Novartis) - Multi-modal\, spatial characterization o
 f cellular interactions within salivary glands in Sjögren’s Disease16:1
 016:30Benjamin Hershey (DBSSE) - Unravelling the Regulatory Role of Hepato
 cytes in the Early Metastatic Niche16:3016:50Enes Ugur (FMI/DBSSE) - Same
  cell spatial multi‑omics reveals collapse of mRNA–protein spatial cou
 pling in the aging intestine16:5017:10Panel discussion (Session speakers 
 + Core Facility representatives)17:1017:20Best talk and poster prize17:201
 7:25Thank you noteApéro17:2519:00Apéro\\r\\n\\r\\nAbstract submissions a
 re closed now!\\r\\nDeadline for registration to attend the event is Frida
 y 4th September\, 2026.\\r\\nJoin us for an exciting day of scientific exc
 hange with the Basel Spatial Omics community. We look forward to seeing yo
 u there. 
X-ALT-DESC:<p><strong>Registration is now open</strong>.</p>\n<p>Use the li
 nk below for registrations. Abstract submissions are closed now. &nbsp\;</
 p>\n<p>Click here for <a href="https://www.eventbrite.co.uk/e/3rd-basel-sp
 atial-omics-symposium-tickets-1980078181142"><strong>Registration</strong></a></p>\n<p>Following the success of our last event\, which brought toget
 her over 250 registered participants from academia and industry\, the Spat
 ial Omics Network Basel is holding its next symposium on<strong> Friday\, 
 September 11th\, 2026&nbsp\;</strong> in the Maurice E. Müller Hall at th
 e Biozentrum in Basel<strong>. </strong>This symposium has become a key lo
 cal forum for the Spatial Omics community in Basel. This interactive full-
 day event will bring together researchers\, technology developers\, and st
 udents interested in the development and application of Spatial Omics tech
 nologies. The event will feature scientific presentations from academic an
 d industry groups across the Basel area\, including contributions from the
  University of Basel (Biozentrum\, DBM\, IOB)\, ETH (D-BSSE)\, Roche\, Nov
 artis\, FMI\, and BIIE. The symposium is <strong>free of charge</strong> a
 nd is organised by the Basel Spatial Omics Network.</p>\n<p><strong>Scient
 ific program:</strong></p>\n\n<table><tbody><tr><td>&nbsp\;</td><td colspa
 n="2"><span><strong>Time</strong></span></td><td><span><strong>Program</st
 rong></span></td></tr><tr><td>&nbsp\;</td><td><span>8:00</span></td><td><s
 pan>9:00</span></td><td><span>Registrations</span></td></tr><tr><td rowspa
 n="9"><p><span>&nbsp\;</span></p><p><span>&nbsp\;</span></p><p><span>&nbsp
 \;</span></p><p><span>&nbsp\;</span></p><p><span>&nbsp\;</span></p><p><spa
 n>&nbsp\;</span></p><p><span>&nbsp\;</span></p><p><span>&nbsp\;</span></p><p><span><strong>Morning session</strong></span></p></td><td><span>9:00</s
 pan></td><td><span>9:05</span></td><td><span>Welcome note</span></td></tr><tr><td><span>9:05</span></td><td><span>9:45</span></td><td><span><strong>
 Keynote speaker - Matts Nilsson (SciLifeLab)</strong> - </span><i><span>Sp
 atial transcriptomics by in situ sequencing</span></i></td></tr><tr><td><s
 pan>9:45</span></td><td><span>10:05</span></td><td><span><strong>Yinan Wan
  (Biozentrum)&nbsp\;</strong>- </span><i><span>Whole-embryo spatiotemporal
  transcriptomics at subcellular resolution</span></i></td></tr><tr><td><sp
 an>10:05</span></td><td><span>10:35</span></td><td><span><strong>Tech Watc
 h:</strong> Sponsors’ welcome note and flash talks</span></td></tr><tr><
 td><span>10:35</span></td><td><span>11:20</span></td><td><span>Coffee brea
 k and poster session</span></td></tr><tr><td><span>11:20</span></td><td><s
 pan>11:40</span></td><td><span><strong>Benedek Pesti (Roche)</strong> - </
 span><i><span>Spatial transcriptomics reveals a niche-specific interferon 
 signature induced by TREM2-targeted therapy</span></i></td></tr><tr><td><s
 pan>11:40</span></td><td><span>12:00</span></td><td><span><strong>Kristy O
 u (DBM)&nbsp\;</strong>- </span><i><span>Tumor cell state reprogramming co
 uples with microenvironment remodeling along the follicular lymphoma trans
 formation axis</span></i></td></tr><tr><td><span>12:00</span></td><td><spa
 n>12:20</span></td><td><span><strong>Curdin Franziscus (Biozentrum)&nbsp\;
 </strong>- </span><i><span>SPEx: Compartment-Resolved Proteomics via Expan
 sion Microscopy–Guided Microdissection</span></i></td></tr><tr><td><span
 >12:20</span></td><td><span>12:40</span></td><td><span><strong>Panel discu
 ssion&nbsp\;</strong></span><i><span>(Session speakers + Platinum &amp\; G
 old sponsor representatives)</span></i></td></tr><tr><td><span><strong>Lun
 ch</strong></span></td><td><span>12:40</span></td><td><span>13:45</span></
 td><td><span>Lunch</span></td></tr><tr><td rowspan="11"><p><span>&nbsp\;</
 span></p><p><span>&nbsp\;</span></p><p><span>&nbsp\;</span></p><p><span>&n
 bsp\;</span></p><p><span>&nbsp\;</span></p><p><span>&nbsp\;</span></p><p><
 span>&nbsp\;</span></p><p><span>&nbsp\;</span></p><p><span>&nbsp\;</span><
 /p><p><span>&nbsp\;</span></p><p><span><strong>Afternoon session</strong><
 /span></p></td><td><span>13:45</span></td><td><span>14:05</span></td><td><
 span><strong>Sarp Uzun (Universitätsspital Basel)&nbsp\;</strong>- </span
 ><i><span>Spatial proteomics and transcriptomics of checkpoint inhibitor-i
 nduced liver injury link shared liver–tumour CD8⁺ T cell clones to cyt
 otoxicity and macrophage crosstalk</span></i></td></tr><tr><td><span>14:05
 </span></td><td><span>14:25</span></td><td><span><strong>Laurent Guerard (
 Biozentrum)</strong> - </span><i><span>A Unified Backbone for Spatial Omic
 s: Leveraging SpatialData and Sopa Beyond MERSCOPE</span></i></td></tr><tr
 ><td><span>14:25</span></td><td><span>14:45</span></td><td><span><strong>M
 ariana Ribeiro (IOB)</strong> - </span><i><span>FLIGHT-seq: Full-Length Is
 oform lonG-read\, High-Throughput sequencing with spatial resolution</span
 ></i></td></tr><tr><td><span>14:45</span></td><td><span>15:05</span></td><
 td><span><strong>Tech Watch:&nbsp\;</strong>Core Facilities overview</span
 ></td></tr><tr><td><span>15:05</span></td><td><span>15:50</span></td><td><
 span>Coffee break and poster session</span></td></tr><tr><td><span>15:50</
 span></td><td><span>16:10</span></td><td><span><strong>Jonas Zierer (Novar
 tis)</strong> - Multi-modal\, spatial characterization of cellular interac
 tions within salivary glands in Sjögren’s Disease</span></td></tr><tr><
 td><span>16:10</span></td><td><span>16:30</span></td><td><span><strong>Ben
 jamin Hershey (DBSSE)</strong> - </span><i><span>Unravelling the Regulator
 y Role of Hepatocytes in the Early Metastatic Niche</span></i></td></tr><t
 r><td><span>16:30</span></td><td><span>16:50</span></td><td><span><strong>
 Enes Ugur (FMI/DBSSE)&nbsp\;</strong>- </span><i><span>Same cell spatial m
 ulti‑omics reveals collapse of mRNA–protein spatial coupling in the ag
 ing intestine</span></i></td></tr><tr><td><span>16:50</span></td><td><span
 >17:10</span></td><td><span><strong>Panel discussion&nbsp\;</strong>(Sessi
 on speakers + Core Facility representatives)</span></td></tr><tr><td><span
 >17:10</span></td><td><span>17:20</span></td><td><span>Best talk and poste
 r prize</span></td></tr><tr><td><span>17:20</span></td><td><span>17:25</sp
 an></td><td><span>Thank you note</span></td></tr><tr><td><span><strong>Ap
 éro</strong></span></td><td><span>17:25</span></td><td><span>19:00</span></td><td><span>Apéro</span></td></tr></tbody></table>\n\n<p><strong>Abstr
 act submissions are closed now!</strong></p>\n<p>Deadline for <strong>regi
 stration</strong> to attend the event is Friday <strong>4th September\, 20
 26.</strong></p>\n<p>Join us for an exciting day of scientific exchange wi
 th the Basel Spatial Omics community. We look forward to seeing you there.
 &nbsp\;</p>\n\n
DTEND;TZID=Europe/Zurich:20260911T190000
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