This event was in the past.
\nThis interactive half-day symposium will bring together researchers\, technology developers\, and s tudents interested in the development and application of spatial OMICS tec hnologies. The event will feature scientific presentations from academic a nd industry groups across the Basel area\, including contributions from th e University of Basel (Biozentrum\, DBE\, DBM)\, ETH (D-BSSE)\, Roche\, No vartis\, FMI\, and BIIE.
\nHighlights of the symposium include:
– Presentations showcasing ongoing research\, technology\, and analysis
developments in spatial transcriptomics and proteomics from the Basel res
earch community
– Two interactive panel discussions
– A coff
ee break and networking apéro
– Short presentations from five spon
sors introducing their latest technologies
This event will also ma rk the launch of the Basel Spatial OMICS Network — join us for an exciti ng afternoon of exchange and collaboration!
\nThe event is free to a ttend\, but registration is required for planning purposes:
\nWe look for ward to welcoming you at the symposium!
\n\n DTEND;TZID=Europe/Zurich:20250904T183000 END:VEVENT BEGIN:VEVENT UID:news4@spatialomicsnetwork.unibas.ch DTSTAMP;TZID=Europe/Zurich:20260217T103646 DTSTART;TZID=Europe/Zurich:20230907T090000 SUMMARY:1st Basel Spatial Omics Symposium DESCRIPTION:The event took place already. Visit the event's website here: B asel Spatial -Omics Meeting\, 7th September 2023 [https://www.notion.so/Ba sel-Spatial-Omics-Meeting-7th-September-2023-83c666ef37cd4aae87b6ff86763cc 9e9]\\r\\nWhy\\r\\nNow is an exciting time for spatial-omics as many new m ethods and technologies are emerging. However\, the volume and novelty of these technologies raises several challenges concerning choice\, implement ation\, and analysis.\\r\\nFortunately\, there are many labs in Basel alre ady implementing these technologies\, developing methods\, and gaining inv aluable experience. Therefore the goal of the meeting is to locally share these experiences\, developments and methods so that we can connect\, lear n from each other’s successes and mistakes\, and help one another choose \, implement\, and analyze these exciting new technologies and data sets.\ \r\\nHow\\r\\nThe meeting will be divided into three sections: protein\, t ranscript and analysis. For each section there will be ≅three talks from local scientists. We are also organizing key note external expert to talk and lead round table discussions. Spatial-omic companies are also to atte nd and be involved in the discussion. A list of potential speakers will be included in the table below.\\r\\nThis is a methods meeting and the talks will focus on the methods as much as or more than the results. We will as k speakers to explain why the method was chosen\, how it works\, and how i t was implemented\, in addition to the scientific application.\\r\\nWhen a nd where\\r\\n7th September 2023 at Pharmazentrum\, Hörsaal 1\, Universit y of Basel. Klingelbergstrasse 50\, 4056 Basel\\r\\nWho\\r\\nAudience:\\r\ \nAny scientists in Basel with experience in or need for spatial technolog ies. Currently\, this includes scientists from\\r\\nBiozentrumDepartment o f Biomedicine (DBM)Univsersitätsspital Basel (USB)Department of Biosystem s Science and Engineering (DBSSE-ETH Zurich)Friedrich Miescher Instititute (affiliated with the University of Basel and Novartis Institute of Biomed ical Research)Institute of Molecular and Clinical Ophthalmology Basel (IOB )several groups at Rocheseveral groups at Novartis\\r\\nOrganisers:\\r\\nS heida Hadji Rasouliha - Biozentrum\\r\\nEwelina Bartoszek - DBM\\r\\nMatth ieu Bourdon - FMI\\r\\n& Microscopy Network Basel\\r\\n\\r\\nSpeakers: \\ r\\nKeynote: **Jessica Sordet-Dessimoz [https://people.epfl.ch/jessica.des simoz?lang=en] - EPFL**\\r\\nSpatial proteomics:\\r\\nEwelina Bartoszek - DBMAsmita Pant and Sarp Uzun - DBM / Unispital Basel- CODEXPhilipp Wahle - DBSSE - 4i & multimodal integration of spatial data\\r\\nSpatial trascrip tomics:\\r\\nSimone Picelli and Mariana Ribeiro - IOB - Curio Seeker kitFr anka Voigt - FMI - sequential FISHInes Böhm - Biozentrum - RNA seqFISHShe ida Hadji Rasouliha - Biozentrum - Vizgen MERSCOPEYinan Wan - Biozetrum - MERFISH in zebrafishDaniel Ham - Biozentrum - RNAscope\\r\\nData analysis: \\r\\nKevin Yamauchi - DBSSE - SpatialData [https://www.biorxiv.org/conten t/10.1101/2023.05.05.539647v1.full.pdf] an open framework for spatial omic sAshley Maynard - DBSSE - Merfish data analysisJoel Lüthi & Nicole Repina - FMI/ - Fractal [https://fractal-analytics-platform.github.io/]\\r\\nCon cluding remarks / resources:\\r\\nMatthieu Bourdon - FMI X-ALT-DESC:The event took place already. Visit the event's website here: Basel Spatial -Omics Meeting\, 7th September 2023
\nNow is an exciting time for spati al-omics as many new methods and technologies are emerging. However\, the volume and novelty of these technologies raises several challenges concern ing choice\, implementation\, and analysis.
\nFortunately\, there ar e many labs in Basel already implementing these technologies\, developing methods\, and gaining invaluable experience. Therefore the goal of the mee ting is to locally share these experiences\, developments and methods so t hat we can connect\, learn from each other’s successes and mistakes\, an d help one another choose\, implement\, and analyze these exciting new tec hnologies and data sets.
\nThe meeting will be divided into three sections: protein\, transcript and analysis. For each section there will be ≅three talks from local scientists. We are also organizing key note external expert to talk and lead round table discussions. Spatia l-omic companies are also to attend and be involved in the discussion. A l ist of potential speakers will be included in the table below.
\nThi s is a methods meeting and the talks will focus on the methods as much as or more than the results. We will ask speakers to explain why the method w as chosen\, how it works\, and how it was implemented\, in addition to the scientific application.
\n7th September 20 23 at Pharmazentrum\, Hörsaal 1\, University of Basel. Klingelbergstrasse 50\, 4056 Basel
\nAudience:
\nAny scientists in Basel with experience in or need for spatial technologie s. Currently\, this includes scientists from
\nOrgani sers:
\nSheida Hadji Rasouliha - Biozentru m
\nEwelina Bartoszek - DBM
\nMatthie u Bourdon - FMI
\n\n\nSpeakers: \;
Keynote: **Jessica Sordet-Dessimoz - EPFL**
\nSpatial proteomics:
\nSpatial trascriptomics:
\nData anal ysis:
\nConcludi ng remarks / resources:
\n